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- /**
- * Copyright 2019 Huawei Technologies Co., Ltd
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- * http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
- #include "dataset/engine/datasetops/batch_op.h"
-
- #include <utility>
- #include <iomanip>
-
- #include "common/utils.h"
- #include "dataset/core/pybind_support.h"
- #include "dataset/engine/data_buffer.h"
- #include "dataset/engine/db_connector.h"
- #include "dataset/engine/opt/pass.h"
- #include "dataset/kernels/data/data_utils.h"
-
- using float16 = Eigen::half;
-
- namespace mindspore {
- namespace dataset {
- BatchOp::Builder::Builder(int32_t batch_size) : builder_drop_(false), builder_pad_(false), builder_pad_map_({}) {
- builder_batch_size_ = batch_size;
- std::shared_ptr<ConfigManager> cfg = GlobalContext::config_manager();
- builder_num_workers_ = cfg->num_parallel_workers();
- builder_op_connector_size_ = cfg->op_connector_size();
- }
-
- Status BatchOp::Builder::Build(std::shared_ptr<BatchOp> *ptr) {
- RETURN_IF_NOT_OK(SanityCheck());
- *ptr = std::make_shared<BatchOp>(builder_batch_size_, builder_drop_, builder_pad_, builder_op_connector_size_,
- builder_num_workers_, builder_cols_to_map_, builder_batch_size_func_,
- builder_batch_map_func_, builder_pad_map_);
- return Status::OK();
- }
-
- Status BatchOp::Builder::SanityCheck() {
- std::string err;
- err += builder_op_connector_size_ <= 0 ? "connector size <= 0\n" : "";
- err += builder_batch_size_ <= 0 ? "batch size <= 0\n" : "";
- err += builder_num_workers_ <= 0 ? "batch num_parallel_workers <= 0\n" : "";
- return err.empty() ? Status::OK() : Status(StatusCode::kUnexpectedError, __LINE__, __FILE__, common::SafeCStr(err));
- }
-
- BatchOp::BatchOp(int32_t batch_size, bool drop, bool pad, int32_t op_queue_size, int32_t num_workers,
- const std::vector<std::string> &cols_to_map, py::function batch_size_func, py::function batch_map_func,
- PadInfo pad_map)
- : ParallelOp(num_workers, op_queue_size),
- start_batch_size_(batch_size),
- drop_(drop),
- pad_(pad),
- pyfunc_column_names_(cols_to_map),
- batch_size_func_(batch_size_func),
- batch_map_func_(batch_map_func),
- pad_info_(pad_map) {
- worker_queues_.Init(num_workers, op_queue_size);
- }
-
- Status BatchOp::operator()() {
- Status rc = LaunchThreadsAndInitOp();
- // Synchronize with TaskManager
- TaskManager::FindMe()->Post();
- RETURN_IF_NOT_OK(rc);
- int64_t epoch_num = 0, batch_num = 0, cnt = 0;
- TensorRow new_row;
- std::unique_ptr<TensorQTable> table = std::make_unique<TensorQTable>();
- child_iterator_ = std::make_unique<ChildIterator>(this, 0, 0);
- RETURN_IF_NOT_OK(child_iterator_->FetchNextTensorRow(&new_row));
- int32_t cur_batch_size = 0;
- RETURN_IF_NOT_OK(GetBatchSize(&cur_batch_size, CBatchInfo(0, 0, 0)));
- while (child_iterator_->eof_handled() == false) {
- while (new_row.empty() == false) {
- table->emplace_back(new_row);
- // if # of rows is enough to make 1 batch (1 batch is buffer), send it to worker_queue
- if (table->size() == static_cast<size_t>(cur_batch_size)) {
- RETURN_IF_NOT_OK(worker_queues_[cnt++ % num_workers_]->EmplaceBack(
- std::make_pair(std::move(table), CBatchInfo(epoch_num, batch_num++, cnt - epoch_num))));
- table = std::make_unique<TensorQTable>();
- RETURN_IF_NOT_OK(GetBatchSize(&cur_batch_size, CBatchInfo(epoch_num, batch_num, cnt - epoch_num)));
- }
- RETURN_IF_NOT_OK(child_iterator_->FetchNextTensorRow(&new_row));
- }
- // Reminder logic, execute only when there is a remainder (table is non empty) and don't drop
- if (drop_ == false && table->empty() == false) {
- RETURN_IF_NOT_OK(worker_queues_[cnt++ % num_workers_]->EmplaceBack(
- std::make_pair(std::move(table), CBatchInfo(epoch_num, batch_num++, cnt - epoch_num))));
- }
- table = std::make_unique<TensorQTable>(); // this drops when drop == true
- // end of the current epoch, batch_num should start from 0 again
- batch_num = 0;
- epoch_num++;
- RETURN_IF_NOT_OK(
- worker_queues_[cnt++ % num_workers_]->EmplaceBack(std::make_pair(nullptr, CBatchInfo(batchCtrl::kEOE))));
- RETURN_IF_NOT_OK(GetBatchSize(&cur_batch_size, CBatchInfo(epoch_num, batch_num, cnt - epoch_num)));
- RETURN_IF_NOT_OK(child_iterator_->FetchNextTensorRow(&new_row));
- } // end of eof_handled() == false
- RETURN_IF_NOT_OK(
- worker_queues_[cnt++ % num_workers_]->EmplaceBack(std::make_pair(nullptr, CBatchInfo(batchCtrl::kEOF))));
- // EOF received, send quit signal (an empty buffer) to all workers
- for (int32_t ind = 0; ind < num_workers_; ind++) {
- RETURN_IF_NOT_OK(
- worker_queues_[cnt++ % num_workers_]->EmplaceBack(std::make_pair(nullptr, CBatchInfo(batchCtrl::kQuit))));
- }
- return Status::OK();
- }
-
- void BatchOp::Print(std::ostream &out, bool show_all) const {
- // Always show the id and name as first line regardless if this summary or detailed print
- out << "(" << std::setw(2) << operator_id_ << ") <BatchOp>:";
- if (!show_all) {
- // Call the super class for displaying any common 1-liner info
- ParallelOp::Print(out, show_all);
- // Then show any custom derived-internal 1-liner info for this op
- out << " [batch size: " << start_batch_size_ << "]\n";
- } else {
- // Call the super class for displaying any common detailed info
- ParallelOp::Print(out, show_all);
- // Then show any custom derived-internal stuff
- out << "\nStart batch size: " << start_batch_size_ << "\nDrop remainder: " << (drop_ ? "yes" : "no") << "\n\n";
- }
- }
-
- Status BatchOp::BatchRows(const std::unique_ptr<TensorQTable> *src, const std::unique_ptr<TensorQTable> *dest,
- dsize_t batch_size) {
- if ((*src)->size() != batch_size) {
- RETURN_STATUS_UNEXPECTED("[Internal Batch ERROR] Source table size does not match the batch_size");
- }
-
- if (batch_size == 1) {
- TensorRow row = std::move((*src)->front());
- (*src)->pop_front();
- (*dest)->push_back(row);
- for (const auto &tensor : (*dest)->front()) {
- RETURN_IF_NOT_OK(tensor->ExpandDim(0));
- }
- return Status::OK();
- }
-
- TensorRow batched_row;
- auto num_columns = (*src)->front().size();
- for (size_t i = 0; i < num_columns; i++) {
- std::shared_ptr<Tensor> first_tensor = (*src)->at(0).at(i); // first row, column i
- TensorShape first_shape = first_tensor->shape();
- DataType first_type = first_tensor->type();
- TensorShape new_shape = first_shape.PrependDim(static_cast<int64_t>(batch_size));
-
- std::shared_ptr<Tensor> new_tensor;
- if (first_type.IsNumeric()) { // numeric tensor
- RETURN_IF_NOT_OK(Tensor::CreateTensor(&new_tensor, TensorImpl::kFlexible, new_shape, first_type));
- dsize_t j = 0;
- for (auto row : **src) {
- std::shared_ptr<Tensor> old_tensor = row.at(i); // row j, column i
- if (old_tensor->shape() == first_shape) { // check the newly popped rows have the same dim as the first
- RETURN_IF_NOT_OK(new_tensor->InsertTensor({j++}, old_tensor));
- } else {
- RETURN_STATUS_UNEXPECTED("[Batch ERROR] Inconsistent TensorShapes of Column " + std::to_string(i));
- }
- }
- } else { // handle string column differently
- std::vector<std::string> strings;
- for (dsize_t j = 0; j < batch_size; j++) {
- std::shared_ptr<Tensor> old_tensor = (*src)->at(j).at(i);
- for (auto itr = old_tensor->begin<std::string_view>(); itr != old_tensor->end<std::string_view>(); itr++) {
- strings.emplace_back(*itr);
- }
- }
- RETURN_IF_NOT_OK(Tensor::CreateTensor(&new_tensor, strings, new_shape));
- }
- batched_row.emplace_back(new_tensor);
- }
-
- (*dest)->emplace_back(batched_row);
-
- return Status::OK();
- }
-
- Status BatchOp::WorkerEntry(int32_t workerId) {
- TaskManager::FindMe()->Post();
- std::pair<std::unique_ptr<TensorQTable>, CBatchInfo> table_pair;
- RETURN_IF_NOT_OK(worker_queues_[workerId]->PopFront(&table_pair));
- while (table_pair.second.ctrl_ != batchCtrl::kQuit) {
- if (table_pair.second.ctrl_ == batchCtrl::kEOE) {
- RETURN_IF_NOT_OK(out_connector_->Add(workerId, std::make_unique<DataBuffer>(0, DataBuffer::kDeBFlagEOE)));
- } else if (table_pair.second.ctrl_ == batchCtrl::kEOF) {
- RETURN_IF_NOT_OK(out_connector_->Add(workerId, std::make_unique<DataBuffer>(0, DataBuffer::kDeBFlagEOF)));
- } else if (table_pair.second.ctrl_ == batchCtrl::kNoCtrl) {
- std::unique_ptr<DataBuffer> db = nullptr;
- RETURN_IF_NOT_OK(MakeBatchedBuffer(std::move(table_pair), &db));
- RETURN_IF_NOT_OK(out_connector_->Add(workerId, std::move(db)));
- }
- RETURN_IF_NOT_OK(worker_queues_[workerId]->PopFront(&table_pair));
- }
- return Status::OK();
- }
-
- Status BatchOp::MakeBatchedBuffer(std::pair<std::unique_ptr<TensorQTable>, CBatchInfo> table_pair,
- std::unique_ptr<DataBuffer> *db) {
- RETURN_UNEXPECTED_IF_NULL(table_pair.first);
- if (!pyfunc_column_names_.empty()) RETURN_IF_NOT_OK(MapColumns(&table_pair)); // pass it through pyfunc
- if (pad_) RETURN_IF_NOT_OK(PadColumns(&table_pair.first, pad_info_, column_name_id_map_)); // do padding if needed
- (*db) = std::make_unique<DataBuffer>(table_pair.second.batch_num_, DataBuffer::kDeBFlagNone);
- std::unique_ptr<TensorQTable> dest_table = std::make_unique<TensorQTable>();
- RETURN_IF_NOT_OK(BatchRows(&table_pair.first, &dest_table, table_pair.first->size()));
- (*db)->set_tensor_table(std::move(dest_table));
- return Status::OK();
- }
-
- Status BatchOp::LaunchThreadsAndInitOp() {
- RETURN_UNEXPECTED_IF_NULL(tree_);
- RETURN_IF_NOT_OK(worker_queues_.Register(tree_->AllTasks()));
- RETURN_IF_NOT_OK(tree_->LaunchWorkers(num_workers_, std::bind(&BatchOp::WorkerEntry, this, std::placeholders::_1)));
- return Status::OK();
- }
-
- Status BatchOp::EofReceived(int32_t) { return Status::OK(); }
-
- Status BatchOp::EoeReceived(int32_t) {
- state_ = OpState::kDeOpIdle;
- return Status::OK();
- }
-
- Status BatchOp::MapColumns(std::pair<std::unique_ptr<TensorQTable>, CBatchInfo> *table_pair) {
- TensorBatchTable input_table;
- input_table.reserve(pyfunc_column_names_.size());
- for (std::string col_name : pyfunc_column_names_) {
- if (column_name_id_map_.find(col_name) == column_name_id_map_.end()) {
- RETURN_STATUS_UNEXPECTED("column : '" + col_name + "' does not exist\n");
- }
- TensorBatch tensor_batch;
- tensor_batch.reserve(table_pair->first->size());
- size_t col_idx = static_cast<size_t>(column_name_id_map_[col_name]);
- for (size_t row_idx = 0; row_idx < table_pair->first->size(); row_idx++) {
- tensor_batch.push_back(std::move(table_pair->first->at(row_idx)[col_idx]));
- }
- input_table.push_back(std::move(tensor_batch));
- }
-
- // Perform batch map
- TensorBatchTable output_table;
- RETURN_IF_NOT_OK(InvokeBatchMapFunc(&input_table, &output_table, table_pair->second));
-
- // Write back to TensorQTable
- for (size_t input_idx = 0; input_idx < pyfunc_column_names_.size(); input_idx++) {
- size_t col_idx = static_cast<size_t>(column_name_id_map_[pyfunc_column_names_[input_idx]]);
- size_t row_id = 0;
- for (TensorRow &row : *(table_pair->first)) {
- row[col_idx] = std::move(output_table[input_idx][row_id++]);
- }
- }
- return Status::OK();
- }
-
- Status BatchOp::GetBatchSize(int32_t *batch_size, CBatchInfo info) {
- if (batch_size_func_ != nullptr) {
- RETURN_IF_NOT_OK(InvokeBatchSizeFunc(batch_size, info));
- } else {
- (*batch_size) = start_batch_size_;
- }
- return Status::OK();
- }
-
- Status BatchOp::InvokeBatchSizeFunc(int32_t *batch_size, CBatchInfo info) {
- {
- // Acquire Python GIL
- py::gil_scoped_acquire gil_acquire;
- if (Py_IsInitialized() == 0) {
- return Status(StatusCode::kPythonInterpreterFailure, "Python Interpreter is finalized");
- }
- try {
- py::object size = batch_size_func_(info);
- *batch_size = size.cast<int32_t>();
- if (*batch_size <= 0) {
- return Status(StatusCode::kPyFuncException, "Batch size function should return an integer > 0");
- }
- } catch (const py::error_already_set &e) {
- return Status(StatusCode::kPyFuncException, e.what());
- } catch (const py::cast_error &e) {
- return Status(StatusCode::kPyFuncException, "Batch size function should return an integer > 0");
- }
- }
- return Status(StatusCode::kOK, "Batch size func call succeed");
- }
-
- Status BatchOp::InvokeBatchMapFunc(TensorBatchTable *input, TensorBatchTable *output, CBatchInfo info) {
- {
- // Acquire Python GIL
- py::gil_scoped_acquire gil_acquire;
- if (Py_IsInitialized() == 0) {
- return Status(StatusCode::kPythonInterpreterFailure, "Python Interpreter is finalized");
- }
- try {
- // Prepare batch map call back parameters
- py::tuple input_args(input->size() + 1);
- for (size_t i = 0; i < input->size(); i++) {
- std::vector<py::array> np_batch;
- for (std::shared_ptr<Tensor> t : input->at(i)) {
- py::array np_array;
- RETURN_IF_NOT_OK(t->GetDataAsNumpy(&np_array));
- np_batch.push_back(std::move(np_array));
- }
- input_args[i] = np_batch;
- }
- input_args[input->size()] = info;
- // Invoke batch map func
- py::object ret_py_obj = batch_map_func_(*input_args);
- // Parse batch map return value
- py::tuple ret_tuple = py::cast<py::tuple>(ret_py_obj);
- if (ret_tuple.size() != pyfunc_column_names_.size() || !py::isinstance<py::tuple>(ret_tuple)) {
- return Status(StatusCode::kPyFuncException, "Batch map function should return a tuple");
- }
- for (size_t i = 0; i < ret_tuple.size(); i++) {
- TensorBatch output_batch;
- py::list output_list = py::cast<py::list>(ret_tuple[i]);
- for (size_t j = 0; j < output_list.size(); j++) {
- std::shared_ptr<Tensor> out;
- RETURN_IF_NOT_OK(Tensor::CreateTensor(&out, py::cast<py::array>(output_list[j])));
- output_batch.push_back(std::move(out));
- }
- output->push_back(std::move(output_batch));
- }
- } catch (const py::error_already_set &e) {
- return Status(StatusCode::kPyFuncException, e.what());
- } catch (const py::cast_error &e) {
- return Status(StatusCode::kPyFuncException, "Batch map function should return an tuple of list of numpy array");
- }
- }
- return Status(StatusCode::kOK);
- }
-
- Status BatchOp::PadColumns(std::unique_ptr<TensorQTable> *table, const PadInfo &pad_info,
- const std::unordered_map<std::string, int32_t> &column_name_id_map) {
- RETURN_UNEXPECTED_IF_NULL(table); // placeholder for now, might need this in the future
- CHECK_FAIL_RETURN_UNEXPECTED((*table)->front().size() == column_name_id_map.size(), "col_name_map mismatch");
- std::vector<std::shared_ptr<Tensor>> pad_vals(column_name_id_map.size(),
- 0); // value to pad each column's tensor with, default 0
- std::set<int32_t> pad_cols;
- // padded_shape provided by user, maximum shapes of current batch of tensors
- std::vector<std::vector<dsize_t>> pad_shapes(column_name_id_map.size()), max_shapes(column_name_id_map.size());
- RETURN_IF_NOT_OK(UnpackPadInfo(pad_info, column_name_id_map, &pad_cols, &pad_vals, &pad_shapes));
-
- // init each shape in max_shape to {-1,-1...} init each unspecified shape in pad_shape to -1 as well
- for (size_t col_id : pad_cols) {
- max_shapes[col_id] = std::vector<dsize_t>((*table)->front()[col_id]->Rank(), -1);
- if (pad_shapes[col_id].empty()) pad_shapes[col_id] = max_shapes[col_id]; // fill pad shape with -1
- CHECK_FAIL_RETURN_UNEXPECTED(pad_shapes[col_id].size() == max_shapes[col_id].size(), "wrong rank in pad_shape");
- }
-
- // calculate maximum shape for each column that needs to be padded
- for (const TensorRow &row : **table) { // iterator each row in a batch
- for (size_t col_id : pad_cols) { // iterator each tensor in a row
- CHECK_FAIL_RETURN_UNEXPECTED(row[col_id]->Rank() == max_shapes[col_id].size(),
- "Tensor to be padded together need to have the same rank");
- for (size_t dim = 0; dim < row[col_id]->Rank(); dim++) { // pick the largest number in each dimension
- max_shapes[col_id][dim] = std::max(max_shapes[col_id][dim], row[col_id]->shape()[dim]);
- }
- }
- }
-
- // if user sets a dimension to -1 (None in python), use the max value for current dimension
- for (size_t col_id : pad_cols) {
- for (size_t dim = 0; dim < pad_shapes[col_id].size(); dim++) {
- if (pad_shapes[col_id][dim] < 0) pad_shapes[col_id][dim] = max_shapes[col_id][dim];
- }
- }
-
- // call pad on each tensor that needs to be padded
- for (TensorRow &row : **table) {
- for (size_t col_id : pad_cols) {
- std::shared_ptr<Tensor> pad_tensor;
- RETURN_IF_NOT_OK(PadEnd(row[col_id], &pad_tensor, pad_shapes[col_id], pad_vals[col_id]));
- row[col_id] = pad_tensor;
- }
- }
- return Status::OK();
- }
-
- Status BatchOp::UnpackPadInfo(const PadInfo &pad_info,
- const std::unordered_map<std::string, int32_t> &column_name_id_map,
- std::set<int32_t> *pad_cols, std::vector<std::shared_ptr<Tensor>> *pad_vals,
- std::vector<std::vector<dsize_t>> *pad_shapes) {
- if (pad_info.empty()) { // if pad_info empty, pad every columns automatically
- for (dsize_t col_id = 0; col_id < column_name_id_map.size(); col_id++) {
- pad_cols->insert(col_id);
- }
- } else {
- for (const auto &p : pad_info) {
- auto location = column_name_id_map.find(p.first);
- CHECK_FAIL_RETURN_UNEXPECTED(location != column_name_id_map.end(), "no column exists with name:" + p.first);
- auto col_id = static_cast<dsize_t>(location->second);
- CHECK_FAIL_RETURN_UNEXPECTED(col_id < pad_vals->size() && col_id < pad_shapes->size(), "col_id out of bound");
- pad_cols->insert(col_id);
- (*pad_vals)[col_id] = p.second.second; // set pad values
- (*pad_shapes)[col_id] = p.second.first.AsVector(); // empty vector if shape is unknown
- }
- }
- return Status::OK();
- }
-
- // Visitor accept method for NodePass
- Status BatchOp::Accept(NodePass *p, bool *modified) {
- // Downcast shared pointer then call visitor
- return p->RunOnNode(shared_from_base<BatchOp>(), modified);
- }
-
- } // namespace dataset
- } // namespace mindspore
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