import typing import unittest import logging from d3m import container, exceptions, utils from d3m.metadata import base as metadata_base, hyperparams, params from d3m.primitive_interfaces import base, transformer, unsupervised_learning Inputs = container.List Outputs = container.List class Hyperparams(hyperparams.Hyperparams): pass class TestPrimitiveValidation(unittest.TestCase): def test_multi_produce_missing_argument(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, '\'multi_produce\' method arguments have to be an union of all arguments of all produce methods, but it does not accept all expected arguments'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, }) def produce(self, *, inputs: Inputs, second_inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def test_fit_multi_produce_missing_argument(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, '\'fit_multi_produce\' method arguments have to be an union of all arguments of \'set_training_data\' method and all produce methods, but it does not accept all expected arguments'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, }) def produce(self, *, inputs: Inputs, second_inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def multi_produce(self, *, produce_methods: typing.Sequence[str], inputs: Inputs, second_inputs: Inputs, timeout: float = None, iterations: int = None) -> base.MultiCallResult: pass def test_multi_produce_extra_argument(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, '\'multi_produce\' method arguments have to be an union of all arguments of all produce methods, but it accepts unexpected arguments'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, }) def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def multi_produce(self, *, produce_methods: typing.Sequence[str], inputs: Inputs, second_inputs: Inputs, timeout: float = None, iterations: int = None) -> base.MultiCallResult: pass def test_fit_multi_produce_extra_argument(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, '\'fit_multi_produce\' method arguments have to be an union of all arguments of \'set_training_data\' method and all produce methods, but it accepts unexpected arguments'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, }) def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def fit_multi_produce(self, *, produce_methods: typing.Sequence[str], inputs: Inputs, second_inputs: Inputs, timeout: float = None, iterations: int = None) -> base.MultiCallResult: pass def test_produce_using_produce_methods(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, 'Produce method cannot use \'produce_methods\' argument'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, }) def produce(self, *, inputs: Inputs, produce_methods: typing.Sequence[str], timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def test_hyperparams_to_tune(self): with self.assertRaisesRegex(exceptions.InvalidMetadataError, 'Hyper-parameter in \'hyperparams_to_tune\' metadata does not exist'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, 'hyperparams_to_tune': [ 'foobar', ] }) def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def test_inputs_across_samples(self): with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, 'Method \'.*\' has an argument \'.*\' set as computing across samples, but it does not exist'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, 'hyperparams_to_tune': [ 'foobar', ] }) @base.inputs_across_samples('foobar') def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass with self.assertRaisesRegex(exceptions.InvalidPrimitiveCodeError, 'Method \'.*\' has an argument \'.*\' set as computing across samples, but it is not a PIPELINE argument'): # Silence any validation warnings. with utils.silence(): class TestPrimitive(transformer.TransformerPrimitiveBase[Inputs, Outputs, Hyperparams]): metadata = metadata_base.PrimitiveMetadata({ 'id': '67568a80-dec2-4597-a10f-39afb13d3b9c', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'd3m.primitives.test.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.NUMERICAL_METHOD, ], 'primitive_family': metadata_base.PrimitiveFamily.OPERATOR, 'hyperparams_to_tune': [ 'foobar', ] }) @base.inputs_across_samples('timeout') def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: pass def test_can_detect_too_many_package_components(self): logger = logging.getLogger('d3m.metadata.base') # Ensure a warning message is generated for too many package components with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn.toomany', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive's Python path does not adhere to d3m.primitives namespace specification. " "Reason: must have 5 segments.") # Ensure a warning message is NOT generated for an acceptable number of components with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) def test_with_string_instead_of_enum(self): logger = logging.getLogger(metadata_base.__name__) # Ensure a warning message is NOT generated for an acceptable number of components with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION.name) self.assertEqual(len(cm.records), 1) def test_can_detect_too_few_package_components(self): logger = logging.getLogger(metadata_base.__name__) # Ensure a warning message is generated for too few package components with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.too_few', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive's Python path does not adhere to d3m.primitives namespace specification. " "Reason: must have 5 segments.") # Ensure a warning message is NOT generated for an acceptable number of components with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) def test_can_detect_bad_primitive_family(self): logger = logging.getLogger(metadata_base.__name__) # Ensure a warning message is generated for a bad primitive family with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.bad_family.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive's Python path does not adhere to d3m.primitives namespace specification." " Reason: primitive family segment must match primitive's primitive family.") # Ensure a warning message is NOT generated for an acceptable primitive family with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) def test_can_detect_bad_primitive_name(self): logger = logging.getLogger(metadata_base.__name__) # Ensure a warning message is generated for a bad primitive name with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.bad_name.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive's Python path does not adhere to d3m.primitives namespace specification. " "Reason: must have a known primitive name segment.") # Ensure a warning message is NOT generated for an acceptable primitive name with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) def test_can_detect_kind_not_capitalized(self): logger = logging.getLogger(metadata_base.__name__) # Ensure a warning message is generated for a primitive kind not capitalized properly with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.sklearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive's Python path does not adhere to d3m.primitives namespace specification. " "Reason: primitive kind segment must start with upper case.") # Ensure a warning message is NOT generated for an acceptable primitive kind with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_namespace_compliance('d3m.primitives.classification.random_forest.SKLearn', metadata_base.PrimitiveFamily.CLASSIFICATION) self.assertEqual(len(cm.records), 1) def test_will_generate_warning_for_missing_contact(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', # 'contact': 'mailto:test@example.com', 'uris': 'http://someplace' } }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': 'http://someplace' } }) # Ensure a warning message is generated for a primitive with no contact specified in the metadata.source with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_contact_information(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Contact information such as the email address of the author (e.g., \"mailto:author@example.com\") should be specified in primitive metadata in its \"source.contact\" field.") # Ensure a warning message is NOT generated for a primitive with a contact specified in the metadata.source with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_will_generate_warning_for_empty_contact(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': '', 'uris': ['http://someplace'] } }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': ['http://someplace'] } }) # Ensure a warning message is generated for a primitive with empty contact specified in the metadata.source. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_contact_information(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Contact information such as the email address of the author (e.g., \"mailto:author@example.com\") should be specified in primitive metadata in its \"source.contact\" field.") # Ensure a warning message is NOT generated when a contact value is specified. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_will_not_generate_missing_contact_warning_when_installation_not_specified(self): logger = logging.getLogger(metadata_base.__name__) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'source': { 'name': 'Test author', 'uris': ['http://someplace'] } }) # Ensure a warning message is NOT generated when a contact value is not specified when installation is also # not specified. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_will_generate_warning_for_missing_uris(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', } }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': ['http://someplace'], } }) # Ensure a warning message is generated for a primitive with no uris specified in the metadata.source. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_contact_information(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: A bug reporting URI should be specified in primitive metadata in its \"source.uris\" field.") # Ensure a warning message is NOT generated when uris are specified in the metadata.source. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_will_generate_warning_for_empty_uris(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': [], } }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': ['http://someplace'], } }) # Ensure a warning message is generated for a primitive with empty uris specified in the metadata.source. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_contact_information(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: A bug reporting URI should be specified in primitive metadata in its \"source.uris\" field.") # Ensure a warning message is NOT generated when non empty uris are specified in the metadata.source. with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_validation_will_warn_on_missing_source(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'source': { 'name': 'Test author', 'contact': 'mailto:test@example.com', 'uris': ['http://someplace'], } }) # Ensure a warning message is generated for a primitive with no source with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_contact_information(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: No \"source\" field in the primitive metadata. Metadata should contain contact information and bug reporting URI.") # Ensure a warning message is NOT generated when source is present with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_contact_information(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_validation_will_warn_on_missing_description(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'description': 'primitive description' }) # Ensure a warning message is generated for a primitive with no description with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_description(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive is not providing a description through its docstring.") # Ensure a warning message is NOT generated when description is present with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_description(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_validation_will_warn_on_empty_description(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'description': '' }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'description': 'primitive description' }) # Ensure a warning message is generated for a primitive with no description with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_description(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive is not providing a description through its docstring.") # Ensure a warning message is NOT generated when description is present with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_description(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_validation_will_warn_on_inherited_description(self): logger = logging.getLogger(metadata_base.__name__) bad_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'description': 'A base class for primitives description' }) good_metadata = metadata_base.PrimitiveMetadata({ 'id': 'id', 'version': '0.1.0', 'name': "Test Primitive", 'python_path': 'path', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.PRINCIPAL_COMPONENT_ANALYSIS, ], 'primitive_family': metadata_base.PrimitiveFamily.FEATURE_SELECTION, 'installation': [{ 'type': metadata_base.PrimitiveInstallationType.PIP, 'package': 'foobar', 'version': '0.1.0', }], 'description': 'primitive description' }) # Ensure a warning message is generated for a primitive with no description with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: metadata_base.PrimitiveMetadata()._validate_description(bad_metadata.query()) self.assertEqual(len(cm.records), 1) self.assertEqual(cm.records[0].msg, "%(python_path)s: Primitive is not providing a description through its docstring.") # Ensure a warning message is NOT generated when description is present with self.assertLogs(logger=logger, level=logging.DEBUG) as cm: logger.debug("Dummy log") metadata_base.PrimitiveMetadata()._validate_description(good_metadata.query()) self.assertEqual(len(cm.records), 1) def test_neural_network_mixin(self): class MyNeuralNetworkModuleBase: pass class Params(params.Params): pass class MyNeuralNetworkModule(MyNeuralNetworkModuleBase): pass # Silence any validation warnings. with utils.silence(): class TestPrimitive( base.NeuralNetworkModuleMixin[Inputs, Outputs, Params, Hyperparams, MyNeuralNetworkModuleBase], unsupervised_learning.UnsupervisedLearnerPrimitiveBase[Inputs, Outputs, Params, Hyperparams], ): metadata = metadata_base.PrimitiveMetadata({ 'id': '4164deb6-2418-4c96-9959-3d475dcf9584', 'version': '0.1.0', 'name': "Test neural network module", 'python_path': 'd3m.primitives.layer.super.TestPrimitive', 'algorithm_types': [ metadata_base.PrimitiveAlgorithmType.CONVOLUTIONAL_NEURAL_NETWORK_LAYER, ], 'primitive_family': metadata_base.PrimitiveFamily.LAYER, }) def produce(self, *, inputs: Inputs, timeout: float = None, iterations: int = None) -> base.CallResult[Outputs]: raise exceptions.NotSupportedError def set_training_data(self, *, inputs: Inputs) -> None: raise exceptions.NotSupportedError def fit(self, *, timeout: float = None, iterations: int = None) -> base.CallResult[None]: raise exceptions.NotSupportedError def get_params(self) -> Params: return Params() def set_params(self, *, params: Params) -> None: pass def get_module(self, *, input_module: MyNeuralNetworkModuleBase) -> MyNeuralNetworkModuleBase: return MyNeuralNetworkModule() if __name__ == '__main__': unittest.main()