New translations test.py (French)

lang/fr/gklearn/gedlib/test.py

@@ -0,0 +1,159 @@
+#export LD_LIBRARY_PATH=.:/export/home/lambertn/Documents/gedlibpy/lib/fann/:/export/home/lambertn/Documents/gedlibpy/lib/libsvm.3.22:/export/home/lambertn/Documents/gedlibpy/lib/nomad
+
+#Pour que "import script" trouve les librairies qu'a besoin GedLib
+#Equivalent à définir la variable d'environnement LD_LIBRARY_PATH sur un bash
+import librariesImport
+import gedlibpy
+import networkx as nx
+
+def init() :
+    print("List of Edit Cost Options : ")
+    for i in gedlibpy.list_of_edit_cost_options :
+        print (i)
+    print("")
+
+    print("List of Method Options : ")
+    for j in gedlibpy.list_of_method_options :
+        print (j)
+    print("")
+
+    print("List of Init Options : ")
+    for k in gedlibpy.list_of_init_options :
+        print (k)
+    print("")
+    
+init()
+
+def afficheMatrix(mat) :
+    for i in mat :
+        line = ""
+        for j in i :
+            line+=str(j)
+            line+=" "
+        print(line)
+
+def createNxGraph() :
+    G = nx.Graph()
+    G.add_node("1", chem = "C")
+    G.add_node("2", chem = "0")
+    G.add_edge("1", "2", valence = "1")
+    G.add_node("3", chem = "N")
+    G.add_node("4", chem = "C")
+    G.add_edge("3", "4", valence = "1")
+    G.add_edge("3", "2", valence = "1")
+    return G
+
+#G = createNxGraph()
+
+def addGraphTest() :
+    gedlibpy.restart_env()
+    gedlibpy.load_GXL_graphs('include/gedlib-master/data/datasets/Mutagenicity/data/', 'collections/MUTA_10.xml')
+
+    currentID = gedlibpy.add_graph()
+    print(currentID)
+    
+    gedlibpy.add_node(currentID, "_1", {"chem" : "C"})
+    gedlibpy.add_node(currentID, "_2", {"chem" : "O"})
+    gedlibpy.add_edge(currentID,"_1", "_2",  {"valence": "1"} )
+
+    listID = gedlibpy.get_all_graph_ids()
+    print(listID)
+    print(gedlibpy.get_graph_node_labels(10))
+    print(gedlibpy.get_graph_edges(10))
+    
+    for i in listID : 
+        print(gedlibpy.get_graph_node_labels(i))
+        print(gedlibpy.get_graph_edges(i))
+
+#addGraphTest()
+
+def shortTest() :
+    gedlibpy.restart_env()
+    
+    print("Here is the mini Python function !")
+    
+    gedlibpy.load_GXL_graphs("include/gedlib-master/data/datasets/Mutagenicity/data/", "include/gedlib-master/data/collections/Mutagenicity.xml")
+    listID = gedlibpy.get_all_graph_ids()
+    gedlibpy.set_edit_cost("CHEM_1")
+
+    gedlibpy.init()
+
+    gedlibpy.set_method("BIPARTITE", "")
+    gedlibpy.init_method()
+
+    g = listID[0]
+    h = listID[1]
+
+    gedlibpy.run_method(g,h)
+
+    print("Node Map : ", gedlibpy.get_node_map(g,h))
+    print("Assignment Matrix : ")
+    afficheMatrix(gedlibpy.get_assignment_matrix(g,h))
+    print ("Upper Bound = " + str(gedlibpy.get_upper_bound(g,h)) + ", Lower Bound = " + str(gedlibpy.get_lower_bound(g,h)) + ", Runtime = " + str(gedlibpy.get_runtime(g,h)))
+
+#shortTest()
+
+def classiqueTest() :
+    gedlibpy.restart_env()
+    
+    gedlibpy.load_GXL_graphs('include/gedlib-master/data/datasets/Mutagenicity/data/', 'collections/MUTA_10.xml')
+    listID = gedlibpy.get_all_graph_ids()
+    
+    afficheId = ""
+    for i in listID :
+        afficheId+=str(i) + " "
+    print("Number of graphs = " + str(len(listID)) + ", list of Ids = " + afficheId)
+
+    gedlibpy.set_edit_cost("CHEM_1")
+
+    gedlibpy.init()
+
+    gedlibpy.set_method("IPFP", "")
+    gedlibpy.init_method()
+
+    g = listID[0]
+    h = listID[0]
+
+    gedlibpy.run_method(g,h)
+    liste = gedlibpy.get_all_map(g,h)
+    print("Forward map : " , gedlibpy.get_forward_map(g,h), ", Backward map : ", gedlibpy.get_backward_map(g,h))
+    print("Node Map : ", gedlibpy.get_node_map(g,h))
+    print ("Upper Bound = " + str(gedlibpy.get_upper_bound(g,h)) + ", Lower Bound = " + str(gedlibpy.get_lower_bound(g,h)) + ", Runtime = " + str(gedlibpy.get_runtime(g,h)))
+
+#classiqueTest()
+
+def nxTest(dataset) :
+    gedlibpy.restart_env()
+    
+    for graph in dataset :
+        gedlibpy.add_nx_graph(graph, "")
+        
+    listID = gedlibpy.get_all_graph_ids()
+    gedlibpy.set_edit_cost("CHEM_1")
+    gedlibpy.init()
+    gedlibpy.set_method("IPFP", "")
+    gedlibpy.init_method()
+
+    print(listID)
+    g = listID[0]
+    h = listID[1]
+
+    gedlibpy.run_method(g,h)
+
+    print("Node Map : ", gedlibpy.get_node_map(g,h))
+    print ("Upper Bound = " + str(gedlibpy.get_upper_bound(g,h)) + ", Lower Bound = " + str(gedlibpy.get_lower_bound(g,h)) + ", Runtime = " + str(gedlibpy.get_runtime(g,h)))
+
+#dataset = [createNxGraph(), createNxGraph()]
+#nxTest(dataset)
+
+def LSAPETest(matrixCost) :
+    result = gedlibpy.hungarian_LSAPE(matrixCost)
+    print("Rho = ", result[0], " Varrho = ", result[1], " u = ", result[2], " v = ", result[3])
+
+#LSAPETest([[2,3,4], [5,1,9], [7,10,3]])
+
+def LSAPTest(matrixCost) :
+    result = gedlibpy.hungarian_LSAP(matrixCost)
+    print("Rho = ", result[0], " Varrho = ", result[1], " u = ", result[2], " v = ", result[3])
+
+#LSAPETest([[2,3,4], [5,1,9], [7,10,3]])