图灵的猫
Gitee
4 years ago
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reproduce/AlphaFold2-Chinese/Fold_CN.ipynb
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| @@ -115,7 +115,7 @@ | |||||
| "#@markdown ### MSA选项(custom MSA upload, single sequence, pairing mode)\n", | "#@markdown ### MSA选项(custom MSA upload, single sequence, pairing mode)\n", | ||||
| "msa_mode = \"MMseqs2 (UniRef+Environmental)\" #@param [\"MMseqs2 (UniRef+Environmental)\", \"MMseqs2 (UniRef only)\",\"single_sequence\",\"custom\"]\n", | "msa_mode = \"MMseqs2 (UniRef+Environmental)\" #@param [\"MMseqs2 (UniRef+Environmental)\", \"MMseqs2 (UniRef only)\",\"single_sequence\",\"custom\"]\n", | ||||
| "pair_mode = \"unpaired+paired\" #@param [\"unpaired+paired\",\"paired\",\"unpaired\"] {type:\"string\"}\n", | "pair_mode = \"unpaired+paired\" #@param [\"unpaired+paired\",\"paired\",\"unpaired\"] {type:\"string\"}\n", | ||||
| "#@markdown - \"unpaired+paired\" = pair sequences from same species + unpaired MSA, \"unpaired\" = seperate MSA for each chain, \"paired\" - only use paired sequences.\n", | |||||
| "#@markdown - \"unpaired+paired\" = pair sequences from same species + unpaired MSA, \"unpaired\" = separate MSA for each chain, \"paired\" - only use paired sequences.\n", | |||||
| "\n", | "\n", | ||||
| "# decide which a3m to use\n", | "# decide which a3m to use\n", | ||||
| "if msa_mode.startswith(\"MMseqs2\"):\n", | "if msa_mode.startswith(\"MMseqs2\"):\n", | ||||
| @@ -452,7 +452,7 @@ | |||||
| "**Quick start**\n", | "**Quick start**\n", | ||||
| "1. 把你要预测的氨基酸序列复制进输入框.\n", | "1. 把你要预测的氨基酸序列复制进输入框.\n", | ||||
| "2. 点击\"Runtime\" -> \"Run all\".\n", | "2. 点击\"Runtime\" -> \"Run all\".\n", | ||||
| "3. 目前的模型预测包括5个模块，最终会生成一个3维结构图.\n", | |||||
| "3. 目前的模型预测包括5个模块，最终生成一个3维结构图.\n", | |||||
| "\n", | "\n", | ||||
| "**生成文件**\n", | "**生成文件**\n", | ||||
| "\n", | "\n", | ||||