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- """
- Performance check of AutoGL model + PYG (trainer + dataset)
- """
- import os
- import random
- import numpy as np
- from tqdm import tqdm
-
- os.environ["AUTOGL_BACKEND"] = "pyg"
-
- import torch
- import torch.nn.functional as F
- from torch_geometric.datasets import Planetoid
- import torch_geometric.transforms as T
- from autogl.module.model.pyg import AutoGCN, AutoGAT, AutoSAGE
- from autogl.datasets import utils
- from autogl.solver.utils import set_seed
- import logging
-
- logging.basicConfig(level=logging.ERROR)
-
- def test(model, data, mask):
- model.eval()
-
- if hasattr(model, 'cls_forward'):
- out = model.cls_forward(data)[mask]
- else:
- out = model(data)[mask]
- pred = out.max(1)[1]
- acc = pred.eq(data.y[mask]).sum().item() / mask.sum().item()
- return acc
-
- def train(model, data, args):
- optimizer = torch.optim.Adam(model.parameters(), lr=args.lr, weight_decay=args.weight_decay)
-
- parameters = model.state_dict()
- best_acc = 0.
- for epoch in range(args.epoch):
- model.train()
- optimizer.zero_grad()
- if hasattr(model, 'cls_forward'):
- output = model.cls_forward(data)
- else:
- output = model(data)
- loss = F.nll_loss(output[data.train_mask], data.y[data.train_mask])
- loss.backward()
- optimizer.step()
-
- val_acc = test(model, data, data.val_mask)
- if val_acc > best_acc:
- best_acc = val_acc
- parameters = model.state_dict()
-
- model.load_state_dict(parameters)
- return model
-
- if __name__ == '__main__':
-
- import argparse
- parser = argparse.ArgumentParser('pyg model')
- parser.add_argument('--device', type=str, default='cuda')
- parser.add_argument('--dataset', type=str, choices=['Cora', 'CiteSeer', 'PubMed'], default='Cora')
- parser.add_argument('--repeat', type=int, default=50)
- parser.add_argument('--model', type=str, choices=['gat', 'gcn', 'sage'], default='gat')
- parser.add_argument('--lr', type=float, default=0.01)
- parser.add_argument('--weight_decay', type=float, default=0.0)
- parser.add_argument('--epoch', type=int, default=200)
-
- args = parser.parse_args()
-
- # seed = 100
- dataset = Planetoid(os.path.expanduser('~/.cache-autogl'), args.dataset, transform=T.NormalizeFeatures())
- data = dataset[0].to(args.device)
-
- accs = []
-
- for seed in tqdm(range(args.repeat)):
- set_seed(seed)
-
- if args.model == 'gat':
- model = AutoGAT(
- num_features=dataset.num_node_features,
- num_classes=dataset.num_classes,
- device=args.device,
- init=False
- ).from_hyper_parameter({
- # hp from model
- "num_layers": 2,
- "hidden": [8],
- "heads": 8,
- "dropout": 0.6,
- "act": "elu",
- }).model
- elif args.model == 'gcn':
- model = AutoGCN(
- num_features=dataset.num_node_features,
- num_classes=dataset.num_classes,
- device=args.device,
- init=False
- ).from_hyper_parameter({
- "num_layers": 2,
- "hidden": [16],
- "dropout": 0.5,
- "act": "relu"
- }).model
- elif args.model == 'sage':
- model = AutoSAGE(
- num_features=dataset.num_node_features,
- num_classes=dataset.num_classes,
- device=args.device,
- init=False
- ).from_hyper_parameter({
- "num_layers": 2,
- "hidden": [64],
- "dropout": 0.5,
- "act": "relu",
- "agg": "mean",
- }).model
-
- model.to(args.device)
-
- train(model, data, args)
- acc = test(model, data, data.test_mask)
- accs.append(acc)
- print('{:.4f} ~ {:.4f}'.format(np.mean(accs), np.std(accs)))
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