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model.py 4.0 kB

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  1. """
  2. Performance check of AutoGL model + DGL (trainer + dataset)
  3. """
  4. import os
  5. import numpy as np
  6. from tqdm import tqdm
  7. os.environ["AUTOGL_BACKEND"] = "dgl"
  8. import torch
  9. import torch.nn.functional as F
  10. from dgl.data import CoraGraphDataset, PubmedGraphDataset, CiteseerGraphDataset
  11. from autogl.module.model.dgl import AutoGCN, AutoGAT, AutoSAGE
  12. from autogl.solver.utils import set_seed
  13. import logging
  14. logging.basicConfig(level=logging.ERROR)
  15. def test(model, graph, mask, label):
  16. model.eval()
  17. pred = model(graph)[mask].max(1)[1]
  18. acc = pred.eq(label[mask]).sum().item() / mask.sum().item()
  19. return acc
  20. def train(model, graph, args, label, train_mask, val_mask):
  21. optimizer = torch.optim.Adam(model.parameters(), lr=args.lr, weight_decay=args.weight_decay)
  22. parameters = model.state_dict()
  23. best_acc = 0.
  24. for epoch in range(args.epoch):
  25. model.train()
  26. optimizer.zero_grad()
  27. output = model(graph)
  28. loss = F.nll_loss(output[train_mask], label[train_mask])
  29. loss.backward()
  30. optimizer.step()
  31. val_acc = test(model, graph, val_mask, label)
  32. if val_acc > best_acc:
  33. best_acc = val_acc
  34. parameters = model.state_dict()
  35. model.load_state_dict(parameters)
  36. return model
  37. if __name__ == '__main__':
  38. import argparse
  39. parser = argparse.ArgumentParser('dgl model')
  40. parser.add_argument('--device', type=str, default='cuda')
  41. parser.add_argument('--dataset', type=str, choices=['Cora', 'CiteSeer', 'PubMed'], default='Cora')
  42. parser.add_argument('--repeat', type=int, default=50)
  43. parser.add_argument('--model', type=str, choices=['gat', 'gcn', 'sage'], default='gat')
  44. parser.add_argument('--lr', type=float, default=0.01)
  45. parser.add_argument('--weight_decay', type=float, default=0.0)
  46. parser.add_argument('--epoch', type=int, default=200)
  47. args = parser.parse_args()
  48. # seed = 100
  49. if args.dataset == 'Cora':
  50. dataset = CoraGraphDataset()
  51. elif args.dataset == 'CiteSeer':
  52. dataset = CiteseerGraphDataset()
  53. elif args.dataset == 'PubMed':
  54. dataset = PubmedGraphDataset()
  55. graph = dataset[0].to(args.device)
  56. label = graph.ndata['label']
  57. train_mask = graph.ndata['train_mask']
  58. val_mask = graph.ndata['val_mask']
  59. test_mask = graph.ndata['test_mask']
  60. num_features = graph.ndata['feat'].size(1)
  61. num_classes = dataset.num_classes
  62. accs = []
  63. for seed in tqdm(range(args.repeat)):
  64. set_seed(seed)
  65. if args.model == 'gat':
  66. model = AutoGAT(
  67. num_features=num_features,
  68. num_classes=num_classes,
  69. device=args.device,
  70. init=False
  71. ).from_hyper_parameter({
  72. # hp from model
  73. "num_layers": 2,
  74. "hidden": [8],
  75. "heads": 8,
  76. "dropout": 0.6,
  77. "act": "elu",
  78. }).model
  79. elif args.model == 'gcn':
  80. model = AutoGCN(
  81. num_features=num_features,
  82. num_classes=num_classes,
  83. device=args.device,
  84. init=False
  85. ).from_hyper_parameter({
  86. "num_layers": 2,
  87. "hidden": [16],
  88. "dropout": 0.5,
  89. "act": "relu"
  90. }).model
  91. elif args.model == 'sage':
  92. model = AutoSAGE(
  93. num_features=num_features,
  94. num_classes=num_classes,
  95. device=args.device,
  96. init=False
  97. ).from_hyper_parameter({
  98. "num_layers": 2,
  99. "hidden": [64],
  100. "dropout": 0.5,
  101. "act": "relu",
  102. "agg": "mean",
  103. }).model
  104. model.to(args.device)
  105. train(model, graph, args, label, train_mask, val_mask)
  106. acc = test(model, graph, test_mask, label)
  107. accs.append(acc)
  108. print('{:.4f} ~ {:.4f}'.format(np.mean(accs), np.std(accs)))