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model.py 4.1 kB

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  1. """
  2. Performance check of AutoGL model + DGL (trainer + dataset)
  3. """
  4. import numpy as np
  5. from tqdm import tqdm
  6. import pickle
  7. import torch
  8. import torch.nn.functional as F
  9. from dgl.data import CoraGraphDataset, PubmedGraphDataset, CiteseerGraphDataset
  10. from autogl.module.model.dgl import AutoGCN, AutoGAT, AutoSAGE
  11. from autogl.solver.utils import set_seed
  12. import logging
  13. logging.basicConfig(level=logging.ERROR)
  14. def test(model, graph, mask, label):
  15. model.eval()
  16. pred = model(graph)[mask].max(1)[1]
  17. acc = pred.eq(label[mask]).sum().item() / mask.sum().item()
  18. return acc
  19. def train(model, graph, args, label, train_mask, val_mask):
  20. optimizer = torch.optim.Adam(model.parameters(), lr=args.lr, weight_decay=args.weight_decay)
  21. parameters = model.state_dict()
  22. best_acc = 0.
  23. for epoch in range(args.epoch):
  24. model.train()
  25. optimizer.zero_grad()
  26. output = model(graph)
  27. loss = F.nll_loss(output[train_mask], label[train_mask])
  28. loss.backward()
  29. optimizer.step()
  30. val_acc = test(model, graph, val_mask, label)
  31. if val_acc > best_acc:
  32. best_acc = val_acc
  33. parameters = pickle.dumps(model.state_dict())
  34. model.load_state_dict(pickle.loads(parameters))
  35. return model
  36. if __name__ == '__main__':
  37. import argparse
  38. parser = argparse.ArgumentParser('dgl model')
  39. parser.add_argument('--device', type=str, default='cuda')
  40. parser.add_argument('--dataset', type=str, choices=['Cora', 'CiteSeer', 'PubMed'], default='Cora')
  41. parser.add_argument('--repeat', type=int, default=50)
  42. parser.add_argument('--model', type=str, choices=['gat', 'gcn', 'sage'], default='gat')
  43. parser.add_argument('--lr', type=float, default=0.01)
  44. parser.add_argument('--weight_decay', type=float, default=0.0)
  45. parser.add_argument('--epoch', type=int, default=200)
  46. args = parser.parse_args()
  47. # seed = 100
  48. if args.dataset == 'Cora':
  49. dataset = CoraGraphDataset()
  50. elif args.dataset == 'CiteSeer':
  51. dataset = CiteseerGraphDataset()
  52. elif args.dataset == 'PubMed':
  53. dataset = PubmedGraphDataset()
  54. graph = dataset[0].to(args.device)
  55. # graph = dgl.remove_self_loop(graph)
  56. # graph = dgl.add_self_loop(graph)
  57. label = graph.ndata['label']
  58. train_mask = graph.ndata['train_mask']
  59. val_mask = graph.ndata['val_mask']
  60. test_mask = graph.ndata['test_mask']
  61. num_features = graph.ndata['feat'].size(1)
  62. num_classes = dataset.num_classes
  63. accs = []
  64. for seed in tqdm(range(args.repeat)):
  65. set_seed(seed)
  66. if args.model == 'gat':
  67. model = AutoGAT(
  68. input_dimension=num_features,
  69. output_dimension=num_classes,
  70. device=args.device
  71. ).from_hyper_parameter({
  72. # hp from model
  73. "num_layers": 2,
  74. "hidden": [8],
  75. "heads": 8,
  76. "feat_drop": 0.6,
  77. "dropout": 0.6,
  78. "act": "relu",
  79. }).model
  80. elif args.model == 'gcn':
  81. model = AutoGCN(
  82. input_dimension=num_features,
  83. output_dimension=num_classes,
  84. device=args.device
  85. ).from_hyper_parameter({
  86. "num_layers": 2,
  87. "hidden": [16],
  88. "dropout": 0.5,
  89. "act": "relu"
  90. }).model
  91. elif args.model == 'sage':
  92. model = AutoSAGE(
  93. input_dimension=num_features,
  94. output_dimension=num_classes,
  95. device=args.device
  96. ).from_hyper_parameter({
  97. "num_layers": 2,
  98. "hidden": [64],
  99. "dropout": 0.5,
  100. "act": "relu",
  101. "agg": "gcn",
  102. }).model
  103. model.to(args.device)
  104. train(model, graph, args, label, train_mask, val_mask)
  105. acc = test(model, graph, test_mask, label)
  106. accs.append(acc)
  107. print('{:.4f} ~ {:.4f}'.format(np.mean(accs), np.std(accs)))